Fluorescent N-doped carbon dots from bacterial cellulose for highly sensitive bacterial detection

Abstract

Carbon dots have good dispersion capability, strong visible fluorescence, low toxicity, and photo-induced accepting and donating abilities. Carbon dots were obtained from biomass bacterial cellulose (BC) via one-step hydrothermal carbonization. Effects of hydrothermal time and temperature on the microstructure, fluorescence, and excitation wavelength dependent photoluminescence (PL) behavior were explored for the prepared carbon dots. The results showed that the carbon dots obtained directly from the BC (C dots) had small particle sizes (2.0 to 3.0 nm) and green luminescence behavior. Conversely, the N-doped carbon dots (N-C dots) exhibited more uniform and smaller particle sizes (approximately 1.0 nm), strong blue luminescence, acceptable fluorescence lifetime, and good stability in a wide range of pH values (2.0 to 10.0). Thus, carbon dots could serve as a fluorescent material used in high performance optical cellular imaging and highly sensitive bacterial detection.

Full Article

Fluorescent N-doped Carbon Dots from Bacterial Cellulose for Highly Sensitive Bacterial Detection

Shunli Li,^a Xin Zhao,^a,b Yujie Zhang,^a Honglei Chen,^a,* and Yu Liu ^a,*

Carbon dots have good dispersion capability, strong visible fluorescence, low toxicity, and photo-induced accepting and donating abilities. Carbon dots were obtained from biomass bacterial cellulose (BC) via one-step hydrothermal carbonization. Effects of hydrothermal time and temperature on the microstructure, fluorescence, and excitation wavelength dependent photoluminescence (PL) behavior were explored for the prepared carbon dots. The results showed that the carbon dots obtained directly from the BC (C dots) had small particle sizes (2.0 to 3.0 nm) and green luminescence behavior. Conversely, the N-doped carbon dots (N-C dots) exhibited more uniform and smaller particle sizes (approximately 1.0 nm), strong blue luminescence, acceptable fluorescence lifetime, and good stability in a wide range of pH values (2.0 to 10.0). Thus, carbon dots could serve as a fluorescent material used in high performance optical cellular imaging and highly sensitive bacterial detection.

Keywords: Carbon dots; Bacterial cellulose; Fluorescent; Bacterial detection

Contact information: a: State Key Laboratory of Biobased Material & Green Papermaking, Qilu University of Technology, Shandong Academy of Sciences, Jinan 250353, P.R. China; b: The Key Laboratory of Bio-based Material Science & Technology, Ministry of Education, Northeast Forestry University, Harbin 150040, P.R. China;

* Corresponding authors: chenhonglei_1982@163.com; leoliuyu@163.com

INTRODUCTION

As a novel and fascinating carbon-based material, fluorescent carbon dots with highly sensitive bioimaging, biosensing, and runnable emission are promising alternatives for bacterial detection (Wang et al. 2018a; Yang et al. 2019). Carbon quantum dots mainly consist of a fraction of nanometer sized carbon core surrounded by amorphous carbon frames, and attract attention because of their chemical stability, dispersibility, low photobleaching, biocompatibility, low cost, and low toxicity (Shih et al. 2014; Srinivasan et al. 2019). These interesting properties help the new generation of luminescent materials, which are superior to conventionally used fluorescent organic dyes and luminescent inorganic quantum dots. Optimization of properties and modification of chemical activities involves the use of nitrogen (N) as a general dopant element within carbon materials because of its comparable atomic size and participation in strong valence bonds with carbon atoms (Li et al. 2015). The presence of additional lone pairs of electrons and the commonly introduced defect sites from N-doping would: provide potential active sites and modify the local chemical activities of carbon nanostructures (Zhang et al. 2015; Peng et al. 2016). Based on the benefits of N-doping in carbon nanostructures, it can be extrapolated that the introduction of N into carbon dots will further enhance their versatile properties, which is extremely important both fundamentally and technologically. Therefore, it is valuable and meaningful to obtain uniform and ordered N-doped carbon dots (N-C dots) with a highly sensitive performance from low cost raw materials.

The hydrothermal method is the most attractive route for preparing carbon dots because it is a simple, green, and environmentally friendly method (Liu et al. 2015; Xu et al. 2017). This method involves a chemical reaction in water and an aqueous solution or steam under a certain temperature and pressure. The hydrothermal method allows full use of the carbon resources including recycling (Wang et al. 2011; Li et al. 2017). Simultaneously, carbon dot doping could be efficiently realized under the hydrothermal environment.

Bacterial cellulose (BC) is an inexpensive, environmentally friendly, abundant, and renewable biomass material. BC can be produced on an industrial scale via the microbial fermentation process and has attracted much attention in many fields; however, it has not yet been applied with high value added to the material (Li et al. 2018; Ma et al. 2019). BC is a naturally occurring nanofibrous biomaterial that exhibits unique physical properties and is amenable to chemical modifications. Long chains of BC molecules could form stable crystalline regions by combining with hydrogen bonds (Huang et al. 2019). These characteristics of high purity and good crystallinity are favorable for the formation of uniform structure as well as the improvement of graphitization of carbon materials. Such a characteristic is beneficial to improve fluorescent performance and to broaden the application fields for carbon dots, such as cellular imaging or sensing, drug and gene delivery, and bacterial detection (Wahid et al. 2019).

The present study used a one-step hydrothermal route to produce carbon dots using bacterial cellulose in the presence of citric acid. The different properties were tested for the samples prepared at different hydrothermal temperatures and times. This highly efficient method provides a “green” conversion in a “suitable” N doping environment to prepare the functionalized carbons with excellent fluorescence performance. N doping resulted in a higher stability in fluorescence and the sensitive bacterial detection is more effective by introducing C-N polar bond into the prepared carbon dots. This work delivers an environmentally friendly and simple way to achieve high value-added utilization of BC in the fields of cellular imaging and highly-sensitive bacterial detection.

EXPERIMENTAL

Preparation of Fluorescent Carbon Dots (C-dots) and N-C dots

The fluorescent carbon dots were prepared from bacterial cellulose via one-step hydrothermal carbonization. The bacterial cellulose (10 g), citric acid (1 mL), urea (0 g or 0.5 g), and deionized water (30 mL) were mixed and sealed into a Teflon-lined autoclave, followed by hydrothermal treatment at different temperatures (220, 230, and 240 °C) for different times (4 h, 6 h, and 8 h). The obtained liquid product was centrifuged (18,000 ×g, 20 min) and the resultant supernatant containing luminescent C-dots was dialyzed with a 2000 NWCO dialysis tube against deionized water for 24 h. The prepared samples donated as C-dots-X-Y and N-C-dots-X-Y (X is hydrothermal temperature, Y is hydrothermal time, N is with urea), respectively.

Characterization

The transmission electron microscopy (TEM) images of the prepared carbon dots were obtained on a JEOL 2011 apparatus (Shoshima, Japan) operated at 200 kV. The powder X-ray diffraction (XRD) patterns were measured using a Bruker D4 powder X-ray diffractometer (Karlsruhe, Germany) with Cu Kα radiation at 40 kV and 40 mA. The Raman measurement was performed using a microRaman and reflex spectrometer (Renishaw, Gloucestershire, England) (laser wavelength: 532 nm). Chemical properties of the samples were evaluated by X-ray photoelectron spectroscopy (XPS) on an ESCALAB 250 apparatus by Thermo Fisher (Massachusetts, USA) with Al Ka radiation. Optical adsorption spectra (UV-vis) of the carbon dots were measured on a UV-3600 (Shimadzu, Kyoto, Japan) spectrometer. A FL-7000 fluorescence spectrometer (Hitachi, Hitachi City, Japan) was used to follow the fluorescence spectra of the carbon dots. Fluorescent imaging was tested with confocal laser scanning microscopy using the Leica DMi8 (Wetzlar, Germany) under different wave lengths. Atomic force microscopy (AFM) was employed to observe carbon dots using a Nanoscope III (Veeco Co. Ltd., Oyster City, NY, USA).

Yeast Cell Detection

Yeast cells (0.05 g) were added into 5 mL of different carbon dots solution (C-dots-230-6 and N-C-dots-230-6) by a sterile operation, respectively. Then they were mixed and activated at 30 °C for 24 h. The labeled cells with fluorescence were separated and collected by centrifugation. The collected cell containing conjugate was thoroughly washed and re-suspended using ultrapure water for fluorescence detection by a Leica DMi3000 inverted fluorescence microscope via DAPI, GEP, and Rhod filters.

RESULTS AND DISCUSSION

Overview

Figure 1 provides a schematic diagram for the preparation of C-dots and N-C dots via hydrothermal carbonization from bacterial cellulose in the presence of citric acid. The products were separated to solid and liquid, and the obtained aqueous extract contained fluorescent C-dots and N-C dots. The different carbon dots exhibited different size and fluorescence properties.

Fig. 1. A schematic diagram of the preparation route of the C-dots and N-C dots

Electron Microscopy

The morphologies of C-dots at different hydrothermal times and temperatures were characterized by transmission electron microscopy (Fig. 2a-e). All the C-dots have a quasi-spherical shape with different diameters in the range of 1 nm to 5 nm.

Fig. 2. TEM (a: C-dots-230-4, b: C-dots-230-6, c: C-dots-230-8, d: C-dots-220-6, e: C-dots-240-6, f: N-C-dots-230-6) and AFM images (g: C-dots-230-6, h: N-C-dots-230-6) of the carbon dots from different hydrothermal conditions.

The diameters increased and distribution of C-dots became more uniform with hydrothermal time increased from 4 h to 8 h, respectively (Fig. 2a-c). The similar tendency occurred with the hydrothermal temperature increased from 220 to 240 °C (Fig. 2d-f). The phenomenon may be attributed to an easier aggregation of C-dots at higher hydrothermal temperatures and during a longer time (Zheng et al. 2019). The results indicate that the C-dots-230-6 displays uniform spherical size (approximately 2.0 to 3.0 nm) with homogeneous distribution. Additionally, more uniform and smaller size (approximately 1.0 to 2.0 nm) of the N-C dots were obtained by the facile N-doping method. High resolution TEM images illustrate crystallinity of the prepared C-dots and N-C dots, as shown in the inset of Fig. 1b, f. The lattice parameter of C-dots is ca. 0.21 and 0.32 nm, corresponding to the lattice plane (102), (002) of graphite. However, the lattice parameter of N-C dots is 0.25 nm. The mismatch of lattice parameters could be due to the presence of nitrogen and oxygen, which have also been observed in other nitrogen or oxygen rich carbon dots (Li et al. 2012, 2013; Tang et al. 2012; Habiba et al. 2013). The AFM images (Fig. 2g, h) further confirmed the quasi-spherical shape and good disbursement of the prepared C-dots and N-C dots. The topographic heights of N-C-dots-230-6 were mostly between 1 to 2 nm and more uniform than that of C-Dots, which is consistent with the results of TEM analysis.

X-Ray Photoelectron Spectroscopy

The structures of the prepared carbon dots were further investigated by XRD, Raman, and XPS. The XRD pattern of the C-dots showed one reflex at approximately 23° that can be indexed to the (002) reflections of the graphitic carbon (Fig. 3a) (Zhao et al. 2015).

Fig. 3. XRD (a) Raman (b) and XPS (c-f) images of the C-dots and N-C dots

The peaks of N-C dots gradually sharpening indicate a high degree of crystallinity and the graphitization of the N-C dots, which may be due to the presence of N functional groups improved the local chemical activities and graphitized structure of carbon dots. The Raman spectrum of the samples showed two peaks: the peak at 1335 cm^-1 (D band) reflects the characteristic feature of disordered graphite or crystal defects (C-C), while the G band at 1597 cm^-1 corresponds to graphitic carbon (Fig. 3b) (Ma et al. 2017). Moreover, the ratio of I_D/I_G decreased from 0.25 to 0.18 as a result of the N-doping process, suggesting the formation of an excellent degree of graphitization for N-C dots, which is in agreement with the XRD results. The nature of the carbon, oxygen, and nitrogen species on the surface of the C-dots and N-C dots were explored by XPS technology in Fig. 3c-f. In the C1s spectrum of C-dots (Fig. 3c), peaks for graphitic carbon (C-C, C-H) and ester or ether (C-O) were observed at a binding energy of 284.1 eV and 284.8 eV, respectively (Gong et al. 2019). Each O1s spectrum was resolved into two individual component peaks, namely: (1) hydroxyl groups (C-OH, BE = 533.02 eV), (2) ester or ether (C-O, BE = 531.3 eV) (Fig. 3d) (Arul and Sethuraman 2018). The results exhibit abundant carbon-oxygen functional groups (C-C, C-H, C-O and C-OH) on the surface of the samples because of formation of the carbon dots. However, N-C dots showed that the additional peak at 288.4 eV for the C 1s spectrum belongs to C-N coordination (Wang et al. 2018b), revealing the recovery of covalent bonding and the existence of nitrogen atoms in carbon graphene layers (Fig. 3e). The detailed information about the nitrogen doping groups can be found in the N 1s spectrum (Fig. 3f). The N 1s spectrum can be deconvoluted into three peaks located at 397.9, 399.3, and 400.4 eV, which could be assigned to C-N, N-H, and N-O (Deng et al. 2016; Kim et al. 2018; Yang et al. 2018), respectively. The results indicate that N-C dots with surface functionalization of O or N-containing groups were successfully obtained. In addition, the optimized performance is attributed to N functional groups, which could provide active sites and modify the local chemical activities of carbon nanostructures by: the presence of the additional lone pairs of electrons and the commonly introduced defect sites from N doping (Peng et al. 2016).

Optical Properties

The optical properties of the prepared C-dots and N-C dots were investigated to identify the contributions of the N-doping to fluorescence. Although the color of the C-dots and N-C dots were similar in optical views, distinct differences of absorption spectra were observed. The absorption peak of the C-dots was around 275 nm, while N-C dots showed an absorption feature around 275 nm and 320 nm in UV-vis absorption spectrum (Fig. 4a, d). These shoulder peaks correspond to p-p* transition of C=C bonds and n-p* transition of C=O bonds, respectively (Xu et al. 2016). As shown in UV-visible absorption and photoluminescence emission spectra (Fig. 4b, e), the maximum emission peak wavelengths of the C-dots and N-C dots were at approximately 440 nm and 469 nm. Those wavelengths correspond to 380 nm and 400 nm excitation, and appeared green and strong in blue luminescence behavior, respectively. This is a typical excitation-wavelength-dependent photoluminescence emission for C-dots, and the N-C dots sample showed stronger intensity in Fig. 4e. These results indicate that the N-doped process not only plays key roles in the emission wavelength of the carbon dots, but also contributes to fluorescence intensity due to N functional groups providing active sites for carbon dots. Additionally, all the prepared carbon dots exhibited acceptable fluorescence lifetime and better stability in a wide range of pH values (pH 2.0 to 10.0) (Fig. 4c, f), and N-C dots were relatively more stable (Fig. 4f). The results indicate that N-doping is very effective in modifying surface state and achieving brighter fluorescence emissions (Zhu et al. 2012).

Fig. 4. Optical properties of different carbon dots: Absorption spectra of the C-dots (a) and N-C dots (d) (inset: UV radiation (left) and photograph under day light (right)); Fluorescence spectra with different excitations ranges from 360 nm to 400 nm of the C-dots (b) and N-C dots (e) (inset: curves of Em changes with Ex (left) and photograph under UV light (right)); fluorescence spectra with different pH ranges from 2 to 10 of the C-dots (c) and N-C dots (f).